About Author
- Dr. KALIRAJAN RAJAGOPAL
- Professor & HoD Department of Pharmaceutical Chemistry, JSS College of Pharmacy, (Constituent College, JSS Academy of Higher Education &Research-Deemed to be University, Mysuru) Ooty-643 001, The Nilgiris, Tamilnadu,INDIA The author has about 25 years of teaching and research experience. The Author has more than 125 research publications in reputed National and International journals and has H-index 17 by scopus. He has also published 11 books and 12 patents. He is a recognized research guide for Ph.D in JSS Academy of Health Education and Research and He served as editorial member and reviewer in many reputed National and International journals. He is the winner in Drug Discovery Hackathon-2020 for Covid-19 Drug discovery organized by Govt of India and also received a Research grant of 14.35 lakhs in phase-II research. He is nominated as BOS member in various universities and received about 13 awards. He has organized many national and International seminar/ workshop/ Conferences etc sponsored by various funding agencies.
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Tuesday, February 25, 2020
Wednesday, July 31, 2019
IUPAC Nomenclature for Substituted Alkanes
IUPAC Nomenclature for Substituted
Alkanes
A.
Alkyl Halides
Alkyl halides are compounds which
contain carbon-halogen bonds. They are classified as primary, secondary, or
tertiary, depending upon whether the halogen atom is bonded to a primary, secondary
or tertiary carbon atom. The common names of alkyl halides are obtained by
naming the alkyl group attached to the halogen and adding the name of the
halide as a separate word. Halo alkanes follow the same rules regarding
numbering and alphabetizing as simple-chain alkanes.
CH3-CI
CH3CH2-Br
Methyl
chloride Ethyl bromide
IUPAC Rules for
Naming Alkyl Halides
The
IUPAC names of alkyl halides are obtained by using the following rules:
Rule1. Select the
longest chain to which the halogen is attached and give it the name of the corresponding
alkane. .
Rule2. Prefix the name
of the alkane by chloro, bromo, iodo or fluoro.
Rule3. Number the chain
so as to give the carbon carrying the halogen atom the lowest possible number.
Rule4. Other
substituents are numbered, named and placed as prefixes in alphabetic order. If
there are two or more identical halogen substituents, the prefixes di-,
tri-, tetra-, etc. are used. For example.
B. Alcohols
Alcohol containing molecules replace
the -e at the end of an alkane
name with -ol. The chain is numbered so that the hydroxyl group (-OH) obtains the lowest number even if
the molecule contains multiple bonds. If the two hydroxyl groups are on the
same carbon are known as geminal and
on adjacent carbons it is referred to as vicinal.
Example:
CH3CH2- OH - Ethanol
IUPAC Rules for
Naming Alcohols
In
the IUPAC system, alcohols are named as Alkanols. Following rules are
used:
Rule 1. Select the
longest chain to which the hydroxyl group is attached.
Rule 2. Name the longest
chain. The name is obtained by dropping the final-e from the name of the alkane
that contains the same number of carbon atoms, and adding the ending -ol.
Alkane
-e + ol= Alkanol
Rule 3. Number the chain
to give the lowest number to carbon attached to the hydroxyl group.
Rule 4. Indicate the
position of the hydroxyl group by the number of the carbon attached to the hydroxyl
group.
Rule 5. Other
substituents are numbered, named, and placed as prefixes in alphabetic order.
For example,
Rule 6. Alcohols
containing two or three -OH groups are named as Alkane diols and Alkane triols respectively.
Notice that -e of the corresponding alkane name is retained.
C. Ethers
Ethers are compounds in which an
oxygen atom is bonded to two organic groups (R-O-R). In the common system, the
two alkyl groups attached to the oxygen atom are named in alphabetic order and the
word ether is added. If the groups are same, the prefix di- is
used.
CH3OCH3
Dimethyl ether
CH3CH2OCH3
Ethyl methyl ether
In
the IUPAC system, ethers are named as Alkoxy alkanes. The smaller alkyl group plus
the
oxygen
atom is called an alkoxy substituent.
D. Aldehydes
Aldehydes are compounds in which the
carbonyl group (C=O) is bonded to an organic group and hydrogen (or two
hydrogens). Their common names are related to those of carboxylic acids.
IUPAC Rules for
Naming Aldehydes
In
the IUPAC system, aldehydes are named as Alkanals. Following rules are
used:
Rule 1. Select the
longest chain containing the aldehyde group.
Rule 2. Name the longest
chain. The name is obtained by dropping the final-e from the name of corresponding
alkane, and adding the ending -al.
Alkane
- e + al = Alkanal
Rule 3. Number the chain
by assigning the number 1 to the aldehyde carbon. The number 1 is used to
indicate the position of the carbonyl carbon, since it is always located at the
end of the chain.
Rule 4. Other
substituents are numbered, named, and placed as prefixes in alphabetic order.
For example,
When
there are two aldehyde groups in a molecule, it is named as Alkanedial, Notice
that of the corresponding alkane name is retained.
E. Ketones
Ketones are compounds in which the
carbonyl group (C=O) is bonded to two organic groups. Their common names are
obtained by naming the alkyl groups attached to the carbonyl group and adding
the word ketone.
IUPAC Rules for
Naming Ketones
In
the IUPAC system, ketones are named as Alkanones. Following rules are
used:
Rule 1. Select the
longest chain containing the carbonyl carbon atom.
Rule 2. Name the longest
chain. The name is obtained by dropping the final- from the name of corresponding
alkane, and adding the ending -one.
Rule3. When there are
two carbonyl groups in a molecule, it is named as Alkanedione. Notice that –e
of the corresponding alkane name is retained.
F. Carboxylic
acids
Carboxylic
acids are compounds which contain the carboxyl group (-COOH). Their common names
end in -ic acid.
IUPACRules for
Naming Carboxylic Acids
In the IUPAC system, carboxylic
acids are named as Alkanoic acids. Following rules are used:
Rule1. Select the
longest chain containing the carboxyl group.
Rule2. Name the longest
chain. The name is obtained by dropping the final-e in the name of the corresponding
alkane, and adding the ending -oic acid.
Alkane
- e + oic acid = Alkanoic acid
Rule3. Number the chain
starting with carboxyl carbon as number 1. The number 1 is not used to indicate
the position of the carboxyl carbon, since it is always located at the end of
the chain.
Rule4. Other
substituents are numbered, named, and placed as prefixes in alphabetic order.
For example,
Rule 5. When there are
two carboxyl groups in a molecule, it is named as Alkanedioic acid. Notice that
-e of the corresponding alkane name is retained.
G. Carboxylic acid
derivatives
Carboxylic acid derivatives are compounds
in which the hydroxyl part of the carboxyl group is replaced by various other
groups.
(a) AcidChlorides. Acid chlorides are
derived from acids by replacing OH group by Cl atom
They
are named by changing the ending -ic acid of the corresponding
carboxylic acid to -yl chloride.
(b) Esters. Esters are
derived from acids by replacing the OH group by OR group. Their
name consist of two words. The first word is the name of the alkyl group
attached to the oxygen atom. The second word is derived from the carboxylic
acid name with -ic acid changed to –ate
(c) Anhydrides. Anhydrides are
derived from acids by replacing OH by OCOR. They are named by changing
the suffix acid of the parent acid to anhydride.
(d)Amides. Amides are
derived from acids by replacing OH by NH2. They are named by
replacing the ending -oic acid (of the IUPAC name) or -ic acid (of
the common name) of the corresponding carboxylic acid with the ending -amide.
H. Amines
Amines are derivatives of ammonia
(NH3) in which one or more hydrogen atoms have been replaced by
alkyl or aryl groups. They are classified as primary, secondary or tertiary
depending on the number of groups attached to the nitrogen atom. Abbreviations
for these terms are 1°,2° and 3°respectively.
R-NH2
Primary amines have one alkyl group
attached to the nitrogen atom.
R2NH
Secondary amines have two alkyl groups
attached to the nitrogen atom.
R3N
Tertiary amines have three alkyl groups
attached to the nitrogen atom.
The R groups in secondary and
tertiary amines may be same or different. In the common system, amines are
named by adding the suffix amine to the name of the alkyl group or
groups. The entire name is written as one word. The names of the alkyl
groups are arranged in alphabetic order.
In the IUPAC system, primary amines
are named by replacing the final -e of the parent alkane-amine. If
necessary, a number is added to indicate the position of -NH2 group.
Secondary or tertiary amines are
named as N-substituted derivatives of primary amines. The largest of the groups
attached to nitrogen is chosen as the organic group of the primary amine. The remaining
alkyl groups are named as substituents by using the prefix N- to
indicate that the group attached to nitrogen.
NOMENCLATUREOF
POLYFUNCTIONAL COMPOUNDS
The functional group present in a
molecule determines its class. If it contains an --OH group, the molecule is an
alcohol. If it contains a -COOH group, it is carboxylic acid. Now let us
consider a structure which contains both --OH and -COOH functional groups. It
can be named as an alcohol or a carboxylic acid. The IUPAC system gives higher
priority to -COOH over -OR, and the structure is named as a carboxylic acid.
The --OH group is considered as a substituent.
When a compound contains two or more
different types of functional groups (Poly functional compound), the functional
group which specifies its class is called the Principal functional Group. The other
functional groups are referred to as Substituents. For example, in the
following structure:
The
-COOH group is the principal functional group, while --OH group is a
substituent. The IUPAC name is 3-Hydroxybutanoicacid.
Selection of the
Principal Functional Group
The IUPAC system has laid down the
priority of functional groups for determining the class of a poly functional compound.
Table 8.4 gives a list of functional groups in decreasing order of priority for
citation as the principal functional group. That is, the functional group which
occurs higher up in the priority table is the principal functional group and
specifies the class. Therefore, by having a look at the priority table, you can
at once know the class of poly functional structure.
IUPAC Rules for
Naming Poly functional compounds .
The
IUPAC names of poly functional compounds are obtained by using the following
rules:
Rule 1. Identify the
principal functional group. This gives the class name of the structure. For
example
in the following structure:
The
two functional groups in the above structure are -COOR and -OR. Since –COOH ranks
higher in the priority table, the structure is named as a carboxylic acid.
Rule 2. Number the
longest chain containing the principal functional group from the end closer to it.
Rule3. Write the parent
name corresponding to the number of carbons in the longest chain.
Longest
chain = 5 carbons
Parent
name = pentanoic acid
Rule4. Arrange the substituent
names with position numbers in alphabetic order.
4-Hydroxy-2-methyl
Rule5. Prefix substituent names with the parent name.
4-Hydroxy-2-methylpentanoicacid
Rule6. The following functional
groups are always named as substituents. Their names are prefixed with the
parent name.
-Cl Chloro
-Br Bromo -I Iodo -F Fluoro
-R Alkyl
-OR Alkoxy -NH2
Amine -NO2
Nitro -CN
Cyano
-NO Nitroso
Rule7. Carbon-Carbon double
or triple bonds are usually indicated by integrating-en- or -yn-into
the suffix, as in -enoic acid and -ynol.
Rule8.Compounds containing
a double bond (C=C) and a triple bond (C=C) in the main chain are named as
alkenynes. The position number of the double bond is inserted before –alken and
that of triple bond before -yne.
Tuesday, April 2, 2019
Pharm.D_POC_Proteins_MCQ
Pharm.D_POC_Proteins_MCQ
1.How many amino acids are synthesized by our bodies?
a) 10
b) 20
c) 30
d) 40
2.Aminoacids has
a) both amino group and carboxyl group
b) both amino group and keto group
c) amino group only d) carboxyl group only
3.Sulphur containing amino acids are
a) Cysteine and methionine b) Methionine and threonine
c) Cysteine and threonine
d) Cysteine and serine
4.Which is the most stable structural level for proteins
a) Primary structure
b) Secondary structure
c) Tertiary structure
d)Quaternary structure
5.Which among the following is a simple protein
a) Glycoprotein
b) Chromoprotein
c) Albumin
d) Lipoprotein
6.Which of the following test is used to identify the sulphur containing amino acids
a) Lead-Sulfide test
b) Xanthoproteic test
c) Millons test
d) Ninhydring test
7.Which is a aromatic amino acid
a) Alanine
b) Serine
c) Glutamic acid
d) Tyrosine
8.Which is a aliphatic amino acid
a) Phenyl alanine
b) Tyrosine
c) Leucine
d) Tryptophan
9.Which amino acid is essential only in child hood
a) Arginine
b) Alanine
c) Phenyl alanine
d) Tyrosine
10.Amino acids with hydroxyl groups are
a) serine and alanine
b) alanine and valine
c) serine and threonine
d) valine and isoleucine
1.How many amino acids are synthesized by our bodies?
a) 10
b) 20
c) 30
d) 40
2.Aminoacids has
a) both amino group and carboxyl group
b) both amino group and keto group
c) amino group only d) carboxyl group only
3.Sulphur containing amino acids are
a) Cysteine and methionine b) Methionine and threonine
c) Cysteine and threonine
d) Cysteine and serine
4.Which is the most stable structural level for proteins
a) Primary structure
b) Secondary structure
c) Tertiary structure
d)Quaternary structure
5.Which among the following is a simple protein
a) Glycoprotein
b) Chromoprotein
c) Albumin
d) Lipoprotein
6.Which of the following test is used to identify the sulphur containing amino acids
a) Lead-Sulfide test
b) Xanthoproteic test
c) Millons test
d) Ninhydring test
7.Which is a aromatic amino acid
a) Alanine
b) Serine
c) Glutamic acid
d) Tyrosine
8.Which is a aliphatic amino acid
a) Phenyl alanine
b) Tyrosine
c) Leucine
d) Tryptophan
9.Which amino acid is essential only in child hood
a) Arginine
b) Alanine
c) Phenyl alanine
d) Tyrosine
10.Amino acids with hydroxyl groups are
a) serine and alanine
b) alanine and valine
c) serine and threonine
d) valine and isoleucine
Pharm.D_POC_Carbohydrates_MCQ
Pharm.D_POC_Carbohydrates_MCQ
1.Sucrose is a a) monosaccharide b) disaccharide c) polysaccharide d) triose
2.The general formula of carbohydrate is
a) (CH2O)n b) (C4H2O)n c) (C6H2O)n d) (C2H2O)n COOH
3.Which of the following is NOT a disaccharide?
a) Hyaluronic acid
b) Maltose c) Lactose d) Sucrose
4.Sucrose is composed of which two sugars?
a) Glucose and Glucose
b) Glucose and Fructose
c) Glucose and Galactose
d) Fructose and Galactose
5.Which of the following is a carbohydrate with no nutritional value?
a) Glycogen
b) Starch
c) Dextrin d) Cellulose
6.Which of the following gives a brown colour on reaction with iodine? a) Starch b) Glycogen
c) Dextrin d) Cellulose
7.Which of the following is a test to differentiate mono sacharides from disaccharides
a) Seliwanofs test
b) Iodine test
c) Fehlings test
d) Barfoeds test
8.Which is a test for reducing sugars
a) Molisch test
b) Millons test
c) Tollens test
d) Iodine test
9.Which among the following test is a general test for carbohydrates
a) Biurette test
b) Urea nitrate test
c) Sakaguchi test
d) Molisch test
10.Which test distinguishes aldose from ketose
a) Molisch test
b) Barfoeds test
c) Fehlings test
d) Seliwanofs test
1.Sucrose is a a) monosaccharide b) disaccharide c) polysaccharide d) triose
2.The general formula of carbohydrate is
a) (CH2O)n b) (C4H2O)n c) (C6H2O)n d) (C2H2O)n COOH
3.Which of the following is NOT a disaccharide?
a) Hyaluronic acid
b) Maltose c) Lactose d) Sucrose
4.Sucrose is composed of which two sugars?
a) Glucose and Glucose
b) Glucose and Fructose
c) Glucose and Galactose
d) Fructose and Galactose
5.Which of the following is a carbohydrate with no nutritional value?
a) Glycogen
b) Starch
c) Dextrin d) Cellulose
6.Which of the following gives a brown colour on reaction with iodine? a) Starch b) Glycogen
c) Dextrin d) Cellulose
7.Which of the following is a test to differentiate mono sacharides from disaccharides
a) Seliwanofs test
b) Iodine test
c) Fehlings test
d) Barfoeds test
8.Which is a test for reducing sugars
a) Molisch test
b) Millons test
c) Tollens test
d) Iodine test
9.Which among the following test is a general test for carbohydrates
a) Biurette test
b) Urea nitrate test
c) Sakaguchi test
d) Molisch test
10.Which test distinguishes aldose from ketose
a) Molisch test
b) Barfoeds test
c) Fehlings test
d) Seliwanofs test
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